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International Journal of Current Microbiology and Applied Sciences (IJCMAS)
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Original Research Articles                      Volume : 10, Issue:2, February, 2021

PRINT ISSN : 2319-7692
Online ISSN : 2319-7706
Issues : 12 per year
Publisher : Excellent Publishers
Email : editorijcmas@gmail.com /
submit@ijcmas.com
Editor-in-chief: Dr.M.Prakash
Index Copernicus ICV 2018: 95.39
NAAS RATING 2020: 5.38

Int.J.Curr.Microbiol.App.Sci.2021.10(2): 1158-1175
DOI: https://doi.org/10.20546/ijcmas.2021.1002.137


Functional Characterization of the Two Genes Encoding 1-deoxy-d-xylulose 5-phosphate Synthase in Coleus forskohlii
Sandeep Singh Pagoch1, Ramesh Kumar2, Yashbir S. Bedi1 and Suphla Gupta1,3*
1Plant Biotechnology Department; Indian Institute of Integrative Medicine, Jammu, Jammu & Kashmir, India
2ICAR-National Bureau of Plant Genetic Resources, New Delhi, India
3Academy of Scientific & Innovative Research (AcSIR), CSIR, Anusandhan Bhawan 2 Rafi Marg, New Delhi, India
*Corresponding author
Abstract:

The MEP pathway provides the initial precursors for the biosynthesis of terpenoids and carotenoid. Herein, we are reporting for the first time isolation, characterization and functional validation of the two isoforms of CfDXS gene from Coleus forskohlii. The full-length cDNAs of CfDXS1 and CfDXS2 were 2371 bp and 2541 bp, respectively having an open reading frame of 2148 bp and 2169 bp. The ORFs of CfDXS1 and CfDXS2 encoded protein of 715 and 722 amino acids, respectively, sharing 62.25% identity. Phylogenetic tree analysis classified the two isoforms in their respective plant clades. The CfDXS1 gene was constitutively expressed in all the tissues (root, stem and leaf) of plant whereas CfDXS2 gene expression was found to be higher in roots. The amino acid residues of the active site essential for the catalysis with the substrate, glyceraldehyde 3-phosphate, were found to be conserved in the CfDXS1 and CfDXS2 proteins. Identification of the function of CfDXS2 in the biosynthesis of carotenoid biosynthesis was confirmed using color complementation assay as it accelerated the biosynthesis of β-carotene, which was not as effective in CfDXS1. Therefore, our results suggested the differential role of CfDXS1 and CfDXS2 in the plant growth and development.


Keywords: Carotenoid, Color complementation assay, 2-C-methyl-D-erythritol 4-phosphate (MEP) pathway, Isoprenoid biosynthesis, Modeling

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How to cite this article:

Sandeep Singh Pagoch, Ramesh Kumar, Yashbir S. Bedi and Suphla Gupta. 2021. Functional Characterization of the Two Genes Encoding 1-deoxy-d-xylulose 5-phosphate Synthase in Coleus forskohlii.Int.J.Curr.Microbiol.App.Sci. 10(2): 1158-1175. doi: https://doi.org/10.20546/ijcmas.2021.1002.137
Copyright: This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike license.

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